BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H11SP1|AL426758
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1277 1569 0.0
>3x_Contig1277
Length = 5748
Score = 1569 bits (790), Expect = 0.0
Identities = 799/802 (99%), Gaps = 1/802 (0%)
Strand = Plus / Minus
Query: 1 gatcataatcgttgaacgatttatattttctaccacggaacaacagatcccacgacgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4879 gatcataatcgttgaacgatttatattttctaccacggaacaacagatcccacgacgcat 4820
Query: 61 cgtatttctttctagtcgatatttcgatatctggaatcaactccaatggcgaaaccgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4819 cgtatttctttctagtcgatatttcgatatctggaatcaactccaatggcgaaaccgggg 4760
Query: 121 tttcttcaataggcttgatcttcacatttgacataagttctgataacgacggttcttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4759 tttcttcaataggcttgatcttcacatttgacataagttctgataacgacggttcttgtg 4700
Query: 181 aaagataccttgaagttgctacctttttcaaatctgccatcttcagattagactggaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4699 aaagataccttgaagttgctacctttttcaaatctgccatcttcagattagactggaaaa 4640
Query: 241 agaataggtaccatatcacggtagcacagacaccaaagatagctaagagaacgggcctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4639 agaataggtaccatatcacggtagcacagacaccaaagatagctaagagaacgggcctgg 4580
Query: 301 acctaaaagatggcatattatatcgcgaas-tgataaaaaacgccttacaaccatcatga 359
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4579 acctaaaagatggcatattatatcgcgaagctgataaaaaacgccttacaaccatcatga 4520
Query: 360 atattgagtatttcaaacggcggcaaatacggtaatggcacgctgggttacctcctaagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4519 atattgagtatttcaaacggcggcaaatacggtaatggcacgctgggttacctcctaagg 4460
Query: 420 cttcagttaaagatttccttctgacagtccgaaaaaaattgctgatgctaattatatata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4459 cttcagttaaagatttccttctgacagtccgaaaaaaattgctgatgctaattatatata 4400
Query: 480 aatatatatgtatgttaataaatcacataataagaagatctaaaaaaaaaaaaagttgca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4399 aatatatatgtatgttaataaatcacataataagaagatctaaaaaaaaaaaaagttgca 4340
Query: 540 caaaatcatagcctcataactagaataatagaatagctccatacatgagaaaacataacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4339 caaaatcatagcctcataactagaataatagaatagctccatacatgagaaaacataacc 4280
Query: 600 cagtatttaaatgctcacgaaaccatttgagaaatgaatccccttaaactgcgataggra 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4279 cagtatttaaatgctcacgaaaccatttgagaaatgaatccccttaaactgcgataggaa 4220
Query: 660 catacctgtgatttttttcgtattttcctgatatataatagtgaaggaaaagaaaatctc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4219 catacctgtgatttttttcgtattttcctgatatataatagtgaaggaaaagaaaatctc 4160
Query: 720 acagcgtatatcttgacaacgtgcgatattaaaacgggcatcaccaggacaaaaatacag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4159 acagcgtatatcttgacaacgtgcgatattaaaacgggcatcaccaggacaaaaatacag 4100
Query: 780 gcacgtttttcccaatttagat 801
||||||||||||||||||||||
Sbjct: 4099 gcacgtttttcccaatttagat 4078
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,039
Number of Sequences: 1807
Number of extensions: 14039
Number of successful extensions: 175
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)